NR3C1 Nuclear Receptor Subfamily 3 Group C Member 1 [ (human)]
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Gene Sequences (FASTA) Transcript sequences (FASTA) Protein sequences(FASTA)In addition, your package will include a detailed data report in both TSV and JSONL formats.
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Go to the top of the page Help Official Symbol NR3C1provided by HGNC Official Full Name nuclear receptor subfamily 3 group C member 1provided by HGNC Primary source HGNC:HGNC:7978 See related Ensembl:ENSG00000113580 MIM:138040; AllianceGenome:HGNC:7978 Gene type protein coding RefSeq status REVIEWED Organism Homo sapiens Lineage Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo Also known as GR; GCR; GRL; GCCR; GCRST Summary This gene encodes glucocorticoid receptor, which can function both as a transcription factor that binds to glucocorticoid response elements in the promoters of glucocorticoid responsive genes to activate their transcription, and as a regulator of other transcription factors. This receptor is typically found in the cytoplasm, but upon ligand binding, is transported into the nucleus. It is involved in inflammatory responses, cellular proliferation, and differentiation in target tissues. Mutations in this gene are associated with generalized glucocorticoid resistance. Alternative splicing of this gene results in transcript variants encoding either the same or different isoforms. Additional isoforms resulting from the use of alternate in-frame translation initiation sites have also been described, and shown to be functional, displaying diverse cytoplasm-to-nucleus trafficking patterns and distinct transcriptional activities (PMID:15866175). [provided by RefSeq, Feb 2011] Expression Ubiquitous expression in fat (RPKM 11.8), lung (RPKM 9.9) and 25 other tissues See more Orthologs mouse all NEW Try the new Gene table Try the new Transcript tableGenomic context
Go to the top of the page Help See NR3C1 in Genome Data Viewer Location: 5q31.3 Exon count: 15| Annotation release | Status | Assembly | Chr | Location |
|---|---|---|---|---|
| RS_2025_08 | current | GRCh38.p14 (GCF_000001405.40) | 5 | NC_000005.10 (143277931..143435512, complement) |
| RS_2025_08 | current | T2T-CHM13v2.0 (GCF_009914755.1) | 5 | NC_060929.1 (143809293..143966896, complement) |
| RS_2024_09 | previous assembly | GRCh37.p13 (GCF_000001405.25) | 5 | NC_000005.9 (142657496..142815077, complement) |
Chromosome 5 - NC_000005.10
Genomic regions, transcripts, and products
Go to the top of the page Help Go to reference sequence detailsGenomic Sequence: NC_000005.10 Chromosome 5 Reference GRCh38.p14 Primary Assembly NG_009062.1 RefSeqGene NC_060929.1 Chromosome 5 Alternate T2T-CHM13v2.0 NC_000005.9 Chromosome 5 Reference GRCh37.p13 Primary Assembly
Go to nucleotide: Graphics FASTA GenBank
Expression
Go to the top of the page Help See details Tissue-specific circular RNA induction during human fetal development RNA sequencing of total RNA from 20 human tissues HPA RNA-seq normal tissues- Project title: Tissue-specific circular RNA induction during human fetal development
- Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
- BioProject: PRJNA270632
- Publication: PMID 26076956
- Analysis date: Mon Apr 2 22:54:59 2018
Bibliography
Go to the top of the pageHelpRelated articles in PubMed
- Frequencies of Bcl I, E22E, and N363S of h-GR/NR3C1 restriction fragment length polymorphisms of glucocorticoid receptor gene in Polish adult population. Pietras T, et al. Med Sci Monit, 2010 Oct. PMID 20885351
- [The analysis of the factors influencing the development of glucocorticoid resistance in the etiopathogenesis of severe bronchial asthma]. Panek M, et al. Postepy Biochem, 2010. PMID 21473041
- Effects of chronic academic stress on mental state and expression of glucocorticoid receptor α and β isoforms in healthy Japanese medical students. Kurokawa K, et al. Stress, 2011 Jul. PMID 21438768
- Glucocorticoid receptor haplotype is associated with a decreased risk of delirium in the elderly. Manenschijn L, et al. Am J Med Genet B Neuropsychiatr Genet, 2011 Apr. PMID 21438141
- The dominant negative β isoform of the glucocorticoid receptor is uniquely expressed in erythroid cells expanded from polycythemia vera patients. Varricchio L, et al. Blood, 2011 Jul 14. PMID 21355091, Free PMC Article
See all (1287) citations in PubMed
GeneRIFs: Gene References Into Functions
What's a GeneRIF?- The Glucocorticoid Receptor: Isoforms, Functions, and Contribution to Glucocorticoid Sensitivity. Title: The Glucocorticoid Receptor: Isoforms, Functions, and Contribution to Glucocorticoid Sensitivity.
- The relationship of the methylation status and polymorphism of glucocorticoid receptor gene (NR3C1) with attempted suicide or non-suicidal self-injury patients in schizophrenia. Title: The relationship of the methylation status and polymorphism of glucocorticoid receptor gene (NR3C1) with attempted suicide or non-suicidal self-injury patients in schizophrenia.
- Maternal perceived stress and green spaces during pregnancy are associated with adult offspring gene (NR3C1 and IGF2/H19) methylation patterns in adulthood: A pilot study. Title: Maternal perceived stress and green spaces during pregnancy are associated with adult offspring gene (NR3C1 and IGF2/H19) methylation patterns in adulthood: A pilot study.
- Association between NR3C1 gene polymorphisms and age-related hearing impairment in Qingdao Chinese elderly. Title: Association between NR3C1 gene polymorphisms and age-related hearing impairment in Qingdao Chinese elderly.
- Maternal sensitivity and child internalizing and externalizing behavior: a mediating role for glucocorticoid receptor gene (NR3C1) methylation? Title: Maternal sensitivity and child internalizing and externalizing behavior: a mediating role for glucocorticoid receptor gene (NR3C1) methylation?
- Differential impact of prenatal PTSD symptoms and preconception trauma exposure on placental NR3C1 and FKBP5 methylation. Title: Differential impact of prenatal PTSD symptoms and preconception trauma exposure on placental NR3C1 and FKBP5 methylation.
- Methylation of the Glucocorticoid Receptor Gene (NR3C1) in Adolescents with a History of Childhood Adversity Engaging in Non-Suicidal Self-Injury. Title: Methylation of the Glucocorticoid Receptor Gene (NR3C1) in Adolescents with a History of Childhood Adversity Engaging in Non-Suicidal Self-Injury.
- Glucocorticoid Receptor (GR) Activation Is Associated with Increased cAMP/PKA Signaling in Castration-Resistant Prostate Cancer. Title: Glucocorticoid Receptor (GR) Activation Is Associated with Increased cAMP/PKA Signaling in Castration-Resistant Prostate Cancer.
- Chromatin accessibility and pioneer factor FOXA1 restrict glucocorticoid receptor action in prostate cancer. Title: Chromatin accessibility and pioneer factor FOXA1 restrict glucocorticoid receptor action in prostate cancer.
- The glucocorticoid receptor gene (NR3C1) is linked to and associated with polycystic ovarian syndrome in Italian families. Title: The glucocorticoid receptor gene (NR3C1) is linked to and associated with polycystic ovarian syndrome in Italian families.
Phenotypes
Go to the top of the page HelpFind tests for this gene in the NIH Genetic Testing Registry (GTR)
Review eQTL and phenotype association data in this region using PheGenI
Associated conditions
| Description | Tests |
|---|---|
| Glucocorticoid resistance MedGen: C1841972 OMIM: 615962 GeneReviews: Not available | Compare labs |
EBI GWAS Catalog
| Description |
|---|
| Genome-wide meta-analysis identifies new susceptibility loci for migraine.EBI GWAS CatalogEBI GWAS CatalogPubMed |
| Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs.EBI GWAS CatalogEBI GWAS CatalogPubMed |
Variation
Go to the top of the page HelpSee variants in ClinVar
See studies and variants in dbVar
See Variation Viewer (GRCh37.p13)
See Variation Viewer (GRCh38)
HIV-1 interactions
Go to the top of the page HelpProtein interactions
| Protein | Gene | Interaction | Pubs |
|---|---|---|---|
| Vpr | vpr | Glucocorticoid receptor (GR) agonists, dexamethasone (Dex) and medroxyprogesterone acetate (MPA), enhance HIV-1 Vpr peptide (amino acids 52-96)-mediated apoptosis of CD4+ T-cells in a GR-dependent manner | PubMed |
| vpr | HIV-1 Vpr leucine residues mediate Vpr-Glucocorticoid Receptor (GR) interaction and promoter transactivation; mutation at residue L22 results in 8- to 11-fold higher GRE and HIV-1 LTR transactivation, while L42 and L67 mutants showed reduced activation | PubMed | |
| vpr | HIV-1 Vpr activates transcription of glucocorticoid-responsive promoters by binding directly to p300/CBP co-activators, forming a stable complex with p300 and interacting with ligand-bound glucocorticoid receptor | PubMed | |
| vpr | HIV-1 Vpr potentiates the trans-activation, but not the trans-repression, properties of the glucocorticoid receptor on NF-kappa B and activating protein 1-regulated simple promoters | PubMed | |
| vpr | HIV-1 Vpr (amino acids 22-26 and 64-68) binds to and activates glucocorticoid receptor (GR) and transactivates the HIV-1 LTR promoter through the host GR pathway | PubMed | |
| vpr | HIV-1 Vpr targets the glucocorticoid receptor type II complex through an interaction with Vpr interacting protein 1 (Rip-1), a 41 kDa cytosolic protein that binds to Vpr and in a complex with the human glucocorticoid receptor | PubMed | |
| vpr | HIV-1 Vpr affects the gene expression of glucocorticoid-regulated genes (IL-12, CD44, Toll-like receptor 4 and indolamine 2,3-dioxygenase, macrophage receptor with collagenous structure, and thrombospondin 1) through activation of the GR pathway | PubMed | |
| vpr | Studies suggest effects of HIV-1 Vpr on cytokine expression (IL-2, IL-10, IL-12, TNFalpha and IL-4) and T-cell proliferation may be mediated through activation of the glucocorticoid receptor pathway | PubMed | |
| vpr | Interaction of HIV-1 Vpr and hVIP/mov34 may be involved in the activation of glucocorticoid receptor by Vpr | PubMed | |
| vpr | Transcription factors TFIIH, CDK7, Cyclin H, and MAT1 enhance HIV-1 Vpr activation of glucocorticoid receptor | PubMed | |
| vpr | HIV-1 Vpr synergistically enhances SRC-1 ligand-activated glucocorticoid receptor activity | PubMed | |
| vpr | HIV-1 Vpr (amino acids 1-35) binds to TFIID, an interaction that is associated with the ability of Vpr to stimulate transcription through the glucocorticoid receptor pathway | PubMed | |
| vpr | Specific binding of HIV-1 Vpr (amino acids 15-35) to TFIIB (amino acids 52-55) causes a conformational change in TFIIB and is correlated with the ability of Vpr to stimulate transcription through the glucocorticoid receptor pathway | PubMed |
Go to the HIV-1, Human Interaction Database
Pathways from PubChem
Go to the top of the pageInteractions
Go to the top of the page Help| Products | Interactant | Other Gene | Complex | Source | Pubs | Description |
|---|
General gene information
Go to the top of the page HelpMarkers
- G42349 (e-PCR)
- UniSTS:94208
- RH104235 (e-PCR)
- UniSTS:98560
- PMC64995P2 (e-PCR)
- UniSTS:273428
- NR3C1_1004 (e-PCR)
- UniSTS:277539
- NR3C1_V270 (e-PCR)
- UniSTS:277539
- NR3C1 (e-PCR)
- UniSTS:504891
- STS-U25029 (e-PCR)
- UniSTS:57947
- D5S2378 (e-PCR)
- UniSTS:3680
- SHGC-58162 (e-PCR)
- UniSTS:33390
- L31444 (e-PCR)
- UniSTS:10390
- RH68907 (e-PCR)
- UniSTS:74908
- Nr3c1 (e-PCR), detects polymorphism
- UniSTS:143264
- D5S2472 (e-PCR)
- UniSTS:9903
- bac51148T (e-PCR)
- UniSTS:181430
- SHGC-110504 (e-PCR)
- UniSTS:167866
- SHGC-111096 (e-PCR)
- UniSTS:168137
- G65702 (e-PCR)
- UniSTS:225496
- RH16558 (e-PCR)
- UniSTS:26336
- D5S1871 (e-PCR)
- UniSTS:35571
- bac51616T (e-PCR)
- UniSTS:181493
Related pseudogene(s)
1 found Review record(s) in GeneHomology
- NCBI Orthologs Orthologs from OrthoDB
Gene Ontology Provided by GOA
| Function | Evidence Code | Pubs |
|---|---|---|
| enables DNA binding | IEA Inferred from Electronic Annotationmore info | |
| enables DNA-binding transcription activator activity, RNA polymerase II-specific | IDA Inferred from Direct Assaymore info | PubMed |
| enables DNA-binding transcription factor activity | IDA Inferred from Direct Assaymore info | PubMed |
| enables DNA-binding transcription factor activity | IEA Inferred from Electronic Annotationmore info | |
| enables DNA-binding transcription factor activity | TAS Traceable Author Statementmore info | PubMed |
| enables DNA-binding transcription factor activity, RNA polymerase II-specific | ISA Inferred from Sequence Alignmentmore info | |
| enables DNA-binding transcription repressor activity, RNA polymerase II-specific | IDA Inferred from Direct Assaymore info | PubMed |
| enables Hsp90 protein binding | IPI Inferred from Physical Interactionmore info | PubMed |
| enables RNA binding | IEA Inferred from Electronic Annotationmore info | |
| enables RNA polymerase II cis-regulatory region sequence-specific DNA binding | IDA Inferred from Direct Assaymore info | PubMed |
| enables RNA polymerase II transcription regulatory region sequence-specific DNA binding | IDA Inferred from Direct Assaymore info | PubMed |
| enables TBP-class protein binding | IPI Inferred from Physical Interactionmore info | PubMed |
| enables core promoter sequence-specific DNA binding | IDA Inferred from Direct Assaymore info | PubMed |
| enables estrogen response element binding | IBA Inferred from Biological aspect of Ancestormore info | |
| enables identical protein binding | IEA Inferred from Electronic Annotationmore info | |
| enables lipid binding | IEA Inferred from Electronic Annotationmore info | |
| enables metal ion binding | IEA Inferred from Electronic Annotationmore info | |
| enables nuclear glucocorticoid receptor activity | IEA Inferred from Electronic Annotationmore info | |
| enables nuclear glucocorticoid receptor activity | TAS Traceable Author Statementmore info | PubMed |
| enables nuclear receptor activity | IBA Inferred from Biological aspect of Ancestormore info | |
| enables nuclear receptor activity | IDA Inferred from Direct Assaymore info | PubMed |
| enables nuclear steroid receptor activity | IEA Inferred from Electronic Annotationmore info | |
| enables promoter-specific chromatin binding | IEA Inferred from Electronic Annotationmore info | |
| enables protein binding | IPI Inferred from Physical Interactionmore info | PubMed |
| enables protein kinase binding | IEA Inferred from Electronic Annotationmore info | |
| enables protein kinase binding | IPI Inferred from Physical Interactionmore info | PubMed |
| enables sequence-specific DNA binding | IEA Inferred from Electronic Annotationmore info | |
| enables sequence-specific double-stranded DNA binding | IDA Inferred from Direct Assaymore info | PubMed |
| enables sequence-specific double-stranded DNA binding | IEA Inferred from Electronic Annotationmore info | |
| enables steroid binding | IDA Inferred from Direct Assaymore info | PubMed |
| enables steroid binding | IEA Inferred from Electronic Annotationmore info | |
| enables steroid hormone binding | IDA Inferred from Direct Assaymore info | PubMed |
| enables zinc ion binding | IEA Inferred from Electronic Annotationmore info |
| Process | Evidence Code | Pubs |
|---|---|---|
| acts_upstream_of_or_within adrenal gland development | IEA Inferred from Electronic Annotationmore info | |
| involved_in apoptotic process | IEA Inferred from Electronic Annotationmore info | |
| involved_in astrocyte differentiation | IEA Inferred from Electronic Annotationmore info | |
| involved_in cell division | IEA Inferred from Electronic Annotationmore info | |
| involved_in cellular response to dexamethasone stimulus | IMP Inferred from Mutant Phenotypemore info | PubMed |
| involved_in cellular response to glucocorticoid stimulus | IDA Inferred from Direct Assaymore info | PubMed |
| involved_in cellular response to steroid hormone stimulus | IDA Inferred from Direct Assaymore info | PubMed |
| involved_in cellular response to transforming growth factor beta stimulus | IDA Inferred from Direct Assaymore info | PubMed |
| involved_in chromatin organization | IEA Inferred from Electronic Annotationmore info | |
| involved_in chromosome segregation | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within gene expression | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within glucocorticoid metabolic process | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within mammary gland duct morphogenesis | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within maternal behavior | IEA Inferred from Electronic Annotationmore info | |
| involved_in microglia differentiation | IEA Inferred from Electronic Annotationmore info | |
| involved_in motor behavior | IEA Inferred from Electronic Annotationmore info | |
| involved_in negative regulation of DNA-templated transcription | IDA Inferred from Direct Assaymore info | PubMed |
| involved_in negative regulation of transcription by RNA polymerase II | IDA Inferred from Direct Assaymore info | PubMed |
| involved_in negative regulation of transcription by RNA polymerase II | IMP Inferred from Mutant Phenotypemore info | PubMed |
| involved_in neuroinflammatory response | IEA Inferred from Electronic Annotationmore info | |
| involved_in nuclear receptor-mediated corticosteroid signaling pathway | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within nuclear receptor-mediated glucocorticoid signaling pathway | IEA Inferred from Electronic Annotationmore info | |
| involved_in nuclear receptor-mediated glucocorticoid signaling pathway | IEA Inferred from Electronic Annotationmore info | |
| involved_in nuclear receptor-mediated steroid hormone signaling pathway | IBA Inferred from Biological aspect of Ancestormore info | |
| involved_in positive regulation of DNA-templated transcription | IEA Inferred from Electronic Annotationmore info | |
| involved_in positive regulation of miRNA transcription | IDA Inferred from Direct Assaymore info | PubMed |
| involved_in positive regulation of miRNA transcription | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within positive regulation of neuron apoptotic process | IEA Inferred from Electronic Annotationmore info | |
| involved_in positive regulation of transcription by RNA polymerase II | IDA Inferred from Direct Assaymore info | PubMed |
| involved_in positive regulation of transcription by RNA polymerase II | IMP Inferred from Mutant Phenotypemore info | PubMed |
| involved_in regulation of DNA-templated transcription | IDA Inferred from Direct Assaymore info | PubMed |
| acts_upstream_of_or_within regulation of DNA-templated transcription | IEA Inferred from Electronic Annotationmore info | |
| involved_in regulation of DNA-templated transcription | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within regulation of glucocorticoid biosynthetic process | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within regulation of gluconeogenesis | IEA Inferred from Electronic Annotationmore info | |
| involved_in regulation of transcription by RNA polymerase II | IBA Inferred from Biological aspect of Ancestormore info | |
| acts_upstream_of_or_within response to cortisol | IEA Inferred from Electronic Annotationmore info | |
| involved_in response to glucocorticoid | IEA Inferred from Electronic Annotationmore info | |
| involved_in response to ketone | IEA Inferred from Electronic Annotationmore info | |
| acts_upstream_of_or_within response to wounding | IEA Inferred from Electronic Annotationmore info | |
| involved_in signal transduction | TAS Traceable Author Statementmore info | PubMed |
| involved_in synaptic transmission, glutamatergic | IEA Inferred from Electronic Annotationmore info |
| Component | Evidence Code | Pubs |
|---|---|---|
| located_in centrosome | IEA Inferred from Electronic Annotationmore info | |
| is_active_in chromatin | IBA Inferred from Biological aspect of Ancestormore info | |
| located_in chromatin | ISA Inferred from Sequence Alignmentmore info | |
| located_in chromosome | IEA Inferred from Electronic Annotationmore info | |
| located_in cytoplasm | IDA Inferred from Direct Assaymore info | PubMed |
| located_in cytoplasm | IEA Inferred from Electronic Annotationmore info | |
| located_in cytoplasm | TAS Traceable Author Statementmore info | PubMed |
| located_in cytosol | IDA Inferred from Direct Assaymore info | |
| located_in cytosol | IEA Inferred from Electronic Annotationmore info | |
| located_in cytosol | TAS Traceable Author Statementmore info | |
| located_in membrane | IEA Inferred from Electronic Annotationmore info | |
| located_in mitochondrial matrix | TAS Traceable Author Statementmore info | PubMed |
| located_in mitochondrion | IDA Inferred from Direct Assaymore info | |
| located_in mitochondrion | IEA Inferred from Electronic Annotationmore info | |
| located_in nuclear speck | IDA Inferred from Direct Assaymore info | PubMed |
| located_in nucleoplasm | IDA Inferred from Direct Assaymore info | |
| located_in nucleoplasm | IEA Inferred from Electronic Annotationmore info | |
| located_in nucleoplasm | TAS Traceable Author Statementmore info | |
| is_active_in nucleus | IBA Inferred from Biological aspect of Ancestormore info | |
| located_in nucleus | IC Inferred by Curatormore info | PubMed |
| is_active_in nucleus | IDA Inferred from Direct Assaymore info | PubMed |
| located_in nucleus | IDA Inferred from Direct Assaymore info | PubMed |
| located_in nucleus | IEA Inferred from Electronic Annotationmore info | |
| located_in nucleus | TAS Traceable Author Statementmore info | PubMed |
| part_of protein-containing complex | IDA Inferred from Direct Assaymore info | PubMed |
| located_in spindle | IEA Inferred from Electronic Annotationmore info | |
| located_in synapse | IEA Inferred from Electronic Annotationmore info |
General protein information
Go to the top of the page Help Preferred Names glucocorticoid receptor Names nuclear receptor subfamily 3 group C member 1 variant hGR-B(54) nuclear receptor subfamily 3 group C member 1 variant hGR-B(77) nuclear receptor subfamily 3 group C member 1 variant hGR-B(93) nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)NCBI Reference Sequences (RefSeq)
Go to the top of the page HelpNEW Try the new Transcript table
RefSeqs maintained independently of Annotated Genomes
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.
Genomic
-
NG_009062.1 RefSeqGene
Range 36827..162579 Download GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_000176.3 → NP_000167.1 glucocorticoid receptor isoform alpha
See identical proteins and their annotated locations for NP_000167.1
Status: REVIEWED
Description Transcript Variant: This variant (1) represents the predominant transcript, and encodes the predominant physiological isoform (alpha, also known as GRalpha or GR-A). Variants 1-5 encode the same isoform. Source sequence(s) AC004782, AC091925, X03225 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Related ENSP00000377977.2, ENST00000394464.7 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001018074.1 → NP_001018084.1 glucocorticoid receptor isoform alpha
See identical proteins and their annotated locations for NP_001018084.1
Status: REVIEWED
Description Transcript Variant: This variant (2) contains an alternative 5' terminal non-coding exon, thus has a different 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (alpha). Source sequence(s) AC004782, AC091925, X03225 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001018075.1 → NP_001018085.1 glucocorticoid receptor isoform alpha
See identical proteins and their annotated locations for NP_001018085.1
Status: REVIEWED
Description Transcript Variant: This variant (3) contains an alternative 5' terminal non-coding exon, thus has a different 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (alpha) Source sequence(s) AC004782, AC091925, X03225 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001018076.2 → NP_001018086.1 glucocorticoid receptor isoform alpha
See identical proteins and their annotated locations for NP_001018086.1
Status: REVIEWED
Description Transcript Variant: This variant (4) contains an alternative 5' terminal non-coding exon, thus has a different 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (alpha). Source sequence(s) AC004782, AC091925, BF966114, X03225 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Related ENSP00000427672.1, ENST00000503201.1 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001018077.1 → NP_001018087.1 glucocorticoid receptor isoform alpha
See identical proteins and their annotated locations for NP_001018087.1
Status: REVIEWED
Description Transcript Variant: This variant (5) contains an alternative 5' terminal non-coding exon, thus has a different 5' UTR compared to variant 1. Variants 1-5 encode the same isoform (alpha). Source sequence(s) AC004782, AC091925, X03225 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Related ENSP00000343205.2, ENST00000343796.6 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001020825.2 → NP_001018661.1 glucocorticoid receptor isoform beta
See identical proteins and their annotated locations for NP_001018661.1
Status: REVIEWED
Description Transcript Variant: This variant (6) uses an alternate acceptor splice site at the 3' terminal exon compared to variant 1. This results in a frame-shift and a shorter isoform (beta, also known as GRbeta) with a distinct C-terminus compared to isoform alpha. This isoform resides primarily in the nucleus, lacks hormone-binding activity, and has a dominant negative effect on the action of isoform alpha (PMID:8621628). Source sequence(s) AC004782, AC091925, X03348 Consensus CDS CCDS47298.1 UniProtKB/TrEMBL E5KQF5, H6V745 Related ENSP00000387672.2, ENST00000415690.6 Conserved Domains (3) summary cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor cl11397Location:531 → 729 NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators -
NM_001024094.2 → NP_001019265.1 glucocorticoid receptor isoform gamma
See identical proteins and their annotated locations for NP_001019265.1
Status: REVIEWED
Description Transcript Variant: This variant (7) uses an alternate in-frame donor splice site at one of the coding exons compared to variant 1. This results in an isoform (gamma) that is 1 aa longer than isoform alpha. The insertion of an additional amino acid (arginine) in the DNA binding domain has been reported to decrease transcriptional activation by the glucocorticoid receptor (PMID:10566686). Source sequence(s) AC004782, AC091925, U01351 Consensus CDS CCDS34258.1 UniProtKB/TrEMBL A0A5B9RIM3, E5KQF6 Related ENSP00000231509.3, ENST00000231509.7 Conserved Domains (3) summary cd07076Location:532 → 778 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 495 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001204258.2 → NP_001191187.1 glucocorticoid receptor isoform alpha-B
Status: REVIEWED
Description Transcript Variant: This variant (1) encodes multiple functional isoforms resulting from the use of alternate in-frame, translation initiation codons (PMID:15866175). This RefSeq represents a shorter isoform (alpha-B, also known as GR-B) compared to isoform alpha, and is derived from the use of a downstream AUG (at nt 571-573). Source sequence(s) AC004782, AC091925, CA425706, U01351, X03225 UniProtKB/TrEMBL A0A5B9RIM3 Conserved Domains (3) summary cd07076Location:505 → 751 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:391 → 468 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:1 → 375 GCR; Glucocorticoid receptor -
NM_001204259.2 → NP_001191188.1 glucocorticoid receptor isoform alpha-C1
Status: REVIEWED
Description Transcript Variant: This variant (1) encodes multiple functional isoforms resulting from the use of alternate in-frame, translation initiation codons (PMID:15866175). This RefSeq represents a shorter isoform (alpha-C1, also known as GR-C1) compared to isoform alpha, and is derived from the use of a downstream AUG (at nt 748-750). Source sequence(s) AC004782, AC091925, CA425706, U01351, X03225 UniProtKB/TrEMBL A0A5B9RIM3 Conserved Domains (3) summary cd07076Location:446 → 692 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:332 → 409 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:1 → 316 GCR; Glucocorticoid receptor -
NM_001204260.2 → NP_001191189.1 glucocorticoid receptor isoform alpha-C2
Status: REVIEWED
Description Transcript Variant: This variant (1) encodes multiple functional isoforms resulting from the use of alternate in-frame, translation initiation codons (PMID:15866175). This RefSeq represents a shorter isoform (alpha-C2, also known as GR-C2) compared to isoform alpha, and is derived from the use of a downstream AUG (at nt 760-762). Source sequence(s) AC004782, AC091925, CA425706, U01351, X03225 UniProtKB/TrEMBL A0A5B9RIM3 Conserved Domains (3) summary cd07076Location:442 → 688 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:328 → 405 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:1 → 312 GCR; Glucocorticoid receptor -
NM_001204261.2 → NP_001191190.1 glucocorticoid receptor isoform alpha-C3
Status: REVIEWED
Description Transcript Variant: This variant (1) encodes multiple functional isoforms resulting from the use of alternative in-frame, translation initiation codons (PMID:15866175). This RefSeq represents a shorter isoform (alpha-C3, also known as GR-C3) compared to isoform alpha, and is derived from the use of a downstream AUG (at nt 784-786). Source sequence(s) AC004782, AC091925, CA425706, U01351, X03225 UniProtKB/TrEMBL A0A5B9RIM3 Conserved Domains (3) summary cd07076Location:434 → 680 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:320 → 397 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:1 → 304 GCR; Glucocorticoid receptor -
NM_001204262.2 → NP_001191191.1 glucocorticoid receptor isoform alpha-D1
Status: REVIEWED
Description Transcript Variant: This variant (1) encodes multiple functional isoforms resulting from the use of alternate in-frame, translation initiation codons (PMID:15866175). This RefSeq represents a shorter isoform (alpha-D1, also known as GR-D1) compared to isoform alpha, and is derived from the use of a downstream AUG (at nt 1438-1440). Source sequence(s) AC004782, AC091925, CA425706, U01351, X03225 UniProtKB/TrEMBL B7Z7I2 Conserved Domains (3) summary cd07076Location:216 → 462 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:102 → 179 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:1 → 86 GCR; Glucocorticoid receptor -
NM_001204263.2 → NP_001191192.1 glucocorticoid receptor isoform alpha-D2
Status: REVIEWED
Description Transcript Variant: This variant (1) encodes multiple functional isoforms resulting from the use of alternate in-frame, translation initiation codons (PMID:15866175). This RefSeq represents a shorter isoform (alpha-D2, also known as GR-D2) compared to isoform alpha, and is derived from the use of a downstream AUG (at nt 1483-1485). Source sequence(s) AC004782, AC091925, CA425706, U01351, X03225 UniProtKB/TrEMBL B7Z7I2 Conserved Domains (3) summary cd07076Location:201 → 447 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:87 → 164 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:1 → 71 GCR; Glucocorticoid receptor -
NM_001204264.2 → NP_001191193.1 glucocorticoid receptor isoform alpha-D3
Status: REVIEWED
Description Transcript Variant: This variant (1) encodes multiple functional isoforms resulting from the use of alternate in-frame, translation initiation codons (PMID:15866175). This RefSeq represents a shorter isoform (alpha-D3, also known as GR-D3) compared to isoform alpha, and is derived from the use of a downstream AUG (at nt 1498-1500). Source sequence(s) AC004782, AC091925, CA425706, U01351, X03225 UniProtKB/TrEMBL B7Z7I2 Conserved Domains (3) summary cd07076Location:196 → 442 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:82 → 159 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:1 → 66 GCR; Glucocorticoid receptor -
NM_001204265.2 → NP_001191194.1 glucocorticoid receptor isoform GR-P
Status: REVIEWED
Description Transcript Variant: This variant (8, also known as GR-P) is missing 2 exons from the 3' end, and has a different 3' end compared to variant 1. This results in an isoform (GR-P) with a shorter and unique C-terminus compared to isoform alpha. The function of the encoded protein is not known, however, this variant is highly expressed in cells that are resistant to glucocorticoids, and may act to modulate glucocorticoid responsiveness (PMIDs:7796394, 11358809). Source sequence(s) AA737284, AC091925, BF244382, U01351, U25029 UniProtKB/TrEMBL F5ATB8 Conserved Domains (3) summary cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor cl11397Location:531 → 674 NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators -
NM_001364180.2 → NP_001351109.1 glucocorticoid receptor isoform alpha
Status: REVIEWED
Source sequence(s) AC004782, AC091925 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Related ENSP00000540553.1, ENST00000870494.1 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001364181.2 → NP_001351110.1 glucocorticoid receptor isoform alpha
Status: REVIEWED
Source sequence(s) AC004782, AC091925 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Related ENSP00000540558.1, ENST00000870499.1 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001364182.1 → NP_001351111.1 glucocorticoid receptor isoform alpha
Status: REVIEWED
Source sequence(s) AC004782, AC091925 Consensus CDS CCDS4278.1 UniProtKB/Swiss-Prot A0ZXF9, B0LPG8, D3DQF4, F5ATB7, P04150, P04151, Q53EP5, Q6N0A4 UniProtKB/TrEMBL A0A5B9RIM3, F1D8N4 Conserved Domains (3) summary cd07076Location:531 → 777 NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily cd07172Location:417 → 494 NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers pfam02155Location:26 → 401 GCR; Glucocorticoid receptor -
NM_001364183.2 → NP_001351112.1 glucocorticoid receptor isoform gamma
Status: REVIEWED
Source sequence(s) AC004782, AC091925, BX648553 Consensus CDS CCDS34258.1 UniProtKB/TrEMBL A0A5B9RIM3, E5KQF6 Related ENSP00000422518.1, ENST00000504572.5 -
NM_001364184.2 → NP_001351113.1 glucocorticoid receptor isoform gamma
Status: REVIEWED
Source sequence(s) AC004782, AC091925 Consensus CDS CCDS34258.1 UniProtKB/TrEMBL A0A5B9RIM3, E5KQF6 Related ENSP00000540554.1, ENST00000870495.1 -
NM_001364185.1 → NP_001351114.1 glucocorticoid receptor isoform gamma
Status: REVIEWED
Source sequence(s) AC004782, AC091925 Consensus CDS CCDS34258.1 UniProtKB/TrEMBL A0A5B9RIM3, E5KQF6
RNA
-
NR_157096.2 RNA Sequence
Status: REVIEWED
Source sequence(s) AC004782, AC091925, AK302050
RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2025_08
The following sections contain reference sequences that belong to a specific genome build. Explain
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
Range 143277931..143435512 complement Download GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
Range 143809293..143966896 complement Download GenBank, FASTA, Sequence Viewer (Graphics)
Related sequences
Go to the top of the page Help| Nucleotide | Protein | |
|---|---|---|
| Heading | Accession and Version | |
| Protein Accession | Links | |
|---|---|---|
| GenPept Link | UniProtKB Link | |
| P04150.1 | GenPept | UniProtKB/Swiss-Prot:P04150 |
Additional links
Go to the top of the pageHelpLocus-specific Databases
- NR3C1 database
Gene LinkOut
The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.
Chemical Information- Interologous Interaction Database
- Interologous Interaction Database
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- Nr3c1 products
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- NR3C1 gene expression
- BioGPS
- BioGPS
- BioGRID Open Repository of CRISPR Screens (ORCS)
- BioGRID CRISPR Screen Phenotypes (21 hits/1412 screens)
- Domain Mapping of Disease Mutations
- NR3C1
- Eukaryotic Promoter Database
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- GenAge Database of Aging Related Genes
- GenAge Database of Aging Related Genes
- GlyGen glycoinformatics resource
- GlyGen glycoinformatics resource
- Guide to Pharmacology
- Glucocorticoid receptor / NR3C1 gene
- Human Gene Mutation Database
- Human Gene Mutation Database
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- Human eFP Browser
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- Human eFP Browser
- Ingenuity Pathways Analysis
- Ingenuity Pathways Analysis
- InnateDB
- InnateDB
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- Kyoto Encyclopedia of Genes and Genomes
- Kyoto Encyclopedia of Genes and Genomes
- OMA Browser: Orthologous MAtrix
- OMA Browser: Orthologous MAtrix
- OMA Browser: Orthologous MAtrix
- OMA Browser: Orthologous MAtrix
- OrthoDB catalog of orthologs
- Orthologs
- Pharmacogenomics Knowledge Base
- Annotated Pharmacogenomic Information for NR3C1 [ClinPGx]
- PhosphoSitePlus
- PhosphoSitePlus® - comprehensive post-translational modification resource
- The Gene Wiki
- The Gene Wiki
- The Weizmann Institute of Science GeneCards and MalaCards databases
- GeneCard for NR3C1
- Addgene Non-profit plasmid repository
- Get Plasmids - Addgene
- Bio-Techne
- Glucocorticoid Receptor alpha Antibodies
- GR/NR3C1 Antibodies
- Creative Biogene
- nuclear receptor subfamily 3 group C member 1
- nuclear receptor subfamily 3 group C member 1
- ExactAntigen/Labome
- reagents
- reagent review
- GenScript latest version of gene cDNA ORF Clone
- GenScript latest version of gene cDNA ORF Clone
- GeneCopoeia Inc.
- Order TALEN/CRISPR clones
- Order miRNA target clones
- Order full-length ORF clone
- GeneTex Inc
- Find Quality Antibodies
- Kazusa DNA Research Institute
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- Order GeneID 2908 cDNA Clone|Lysate|Protein|Antibody|RNAi
- GeneMANIA
- GeneMANIA
- Reactome
- Reactome Entity:P04150-4
- Reactome Entity:P04150-3
- Reactome Entity:P04150-2
Supplemental Content
Table of contents
- Summary
- Genomic context
- Genomic regions, transcripts, and products
- Expression
- Bibliography
- Phenotypes
- Variation
- HIV-1 interactions
- Pathways from PubChem
- Interactions
- General gene information Markers, Related pseudogene(s), Homology, Gene Ontology
- General protein information
- NCBI Reference Sequences (RefSeq)
- Related sequences
- Additional links Locus-specific Databases
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Related information
- Order cDNA clone Order cDNA clone
- 3D structures 3D structure of a gene
- BioAssay by Target (List) BioAssays related to the gene by protein target or RNAi target
- BioAssay by Target (Summary) Summarized PubChem Data on the gene, showing the active data by default
- BioAssay, by Gene target PubChem BioAssays done on the Gene target
- BioAssays, RNAi Target, Tested BioAssays that contain the gene as the target of a RNAi reagent
- BioProjects BioProjects related to a gene
- CCDS Link to CCDS
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- Conserved Domains Related CDD
- dbVar Link from Gene to dbVar
- Full text in PMC PMC links
- Full text in PMC_nucleotide Full text in PubMedCentral identified from shared sequence links
- Functional Class Functional class of the sequence domain architecture
- GAP GAP Links
- Gene neighbors Overlapping genes and two nearest non-overlapping genes on either side
- Genes with a similar H3K4me3 profile Genes with a similar profile of promoter-activating H3K4me3 modifications across several tissue types
- Genome Related Genome
- GEO Profiles Related GEO
- GTR Tests for this gene in the NIH Genetic Testing Registry
- HomoloGene Related HomoloGene
- MedGen Related information in MedGen
- Nucleotide Link to related Nucleotide entry
- OMIM Link to related OMIM entry
- Protein Link to related protein entry
- PubChem Compound PubChem Compounds
- PubChem Substance PubChem Substances
- PubMed Link to related PubMed entry
- PubMed (GeneRIF) Link to related PubMed article from GeneRIFs
- PubMed (OMIM) Gene links to PubMed derived from omim_pubmed_cited links
- PubMed(nucleotide/PMC) Citations in PubMed identified from shared sequence and PMC links.
- RefSeq Proteins Link to Protein RefSeqs
- RefSeq RNAs Link to Nucleotide RefSeq RNAs
- RefSeqGene Link to Nucleotide RefSeqGenes
- Related gene-specific medical variations Related medical variations
- SNP Related SNP records
- Taxonomy Link to related taxonomy entry
- Variation Viewer Related Variants
Links to other resources
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