SIRIUS 4: A Rapid Tool For Turning Tandem Mass Spectra ... - PubMed

Clipboard, Search History, and several other advanced features are temporarily unavailable. Skip to main page content

The .gov means it’s official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation Search: Search Advanced Clipboard Save Email Send to

• Clipboard
• My Bibliography
• Collections
• Citation manager

Display options Display options Format Abstract PubMed PMID

Save citation to file

Format: Summary (text) PubMed PMID Abstract (text) CSV Create file Cancel

Email citation

Email address has not been verified. Go to My NCBI account settings to confirm your email and then refresh this page. To: Subject: Body: Format: Summary Summary (text) Abstract Abstract (text) MeSH and other data Send email Cancel

Add to Collections

• Create a new collection
• Add to an existing collection

Name your collection: Name must be less than 100 characters Choose a collection: Unable to load your collection due to an error Please try again Add Cancel

Add to My Bibliography

• My Bibliography

Unable to load your delegates due to an error Please try again Add Cancel

Your saved search

Name of saved search: Search terms: Test search terms Would you like email updates of new search results? Saved Search Alert Radio Buttons

• Yes
• No

Email: (change) Frequency: Monthly Weekly Daily Which day? The first Sunday The first Monday The first Tuesday The first Wednesday The first Thursday The first Friday The first Saturday The first day The first weekday Which day? Sunday Monday Tuesday Wednesday Thursday Friday Saturday Report format: Summary Summary (text) Abstract Abstract (text) PubMed Send at most: 1 item 5 items 10 items 20 items 50 items 100 items 200 items Send even when there aren't any new results Optional text in email: Save Cancel

Create a file for external citation management software

Create file Cancel

Your RSS Feed

Name of RSS Feed: Number of items displayed: 5 10 15 20 50 100 Create RSS Cancel RSS Link Copy

Full text links

Nature Publishing Group Full text links

Actions

CiteCollectionsAdd to Collections

• Create a new collection
• Add to an existing collection

Name your collection: Name must be less than 100 characters Choose a collection: Unable to load your collection due to an errorPlease try again Add Cancel PermalinkPermalinkCopyDisplay options Display options Format AbstractPubMedPMID

Page navigation

• Title & authors
• Abstract
• Publication types
• MeSH terms
• Substances
• LinkOut - more resources

Title & authors Abstract Publication types MeSH terms Substances LinkOut - more resources Full text links CiteDisplay options Display options Format AbstractPubMedPMID

Abstract

Mass spectrometry is a predominant experimental technique in metabolomics and related fields, but metabolite structural elucidation remains highly challenging. We report SIRIUS 4 (https://bio.informatik.uni-jena.de/sirius/), which provides a fast computational approach for molecular structure identification. SIRIUS 4 integrates CSI:FingerID for searching in molecular structure databases. Using SIRIUS 4, we achieved identification rates of more than 70% on challenging metabolomics datasets.

PubMed Disclaimer

Publication types

• Research Support, Non-U.S. Gov't Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search

MeSH terms

• Algorithms Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Bayes Theorem Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Biomarkers Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Cluster Analysis Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Computational Biology / methods Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Computer Graphics Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Databases, Factual Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Electronic Data Processing Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Internet Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Isotopes Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Likelihood Functions Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Metabolome Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Metabolomics / methods* Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Molecular Structure* Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Neural Networks, Computer Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Programming Languages Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Signal Processing, Computer-Assisted* Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Tandem Mass Spectrometry / methods* Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• User-Computer Interface Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search

Substances

• Biomarkers Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search
• Isotopes Actions
  • Search in PubMed
  • Search in MeSH
  • Add to Search

LinkOut - more resources

• Full Text Sources

  • Nature Publishing Group

• Other Literature Sources

  • The Lens - Patent Citations Database

Full text links [x] Nature Publishing Group [x] Cite Copy Download .nbib .nbib Format: AMA APA MLA NLM Send To

• Clipboard
• Email
• Save
• My Bibliography
• Collections
• Citation Manager

[x]

NCBI Literature Resources

MeSH PMC Bookshelf Disclaimer

The PubMed wordmark and PubMed logo are registered trademarks of the U.S. Department of Health and Human Services (HHS). Unauthorized use of these marks is strictly prohibited.