CCDC9B Coiled-coil Domain Containing 9B [ (American Alligator)]

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Create FileAdd to ClipboardAdd to Collections CCDC9B coiled-coil domain containing 9B [ Alligator mississippiensis (American alligator) ] Gene ID: 102572589, updated on 8-May-2024

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Gene Sequences (FASTA) Transcript sequences (FASTA) Protein sequences(FASTA)

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Summary

Go to the top of the page Help Gene symbol CCDC9B Gene description coiled-coil domain containing 9B Locus tag Y1Q_0015947 See related EnsemblRapid:ENSAMIG00015010380 Gene type protein coding RefSeq status MODEL Organism Alligator mississippiensis Lineage Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator Also known as CUNH15orf52 Orthologs all Try the new Gene page Try the new Transcripts and proteins table

Genomic context

Go to the top of the page Help See CCDC9B in Genome Data Viewer Location: chromosome: 2 Exon count: 13

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	rAllMis1 (GCF_030867095.1)	2	NC_081825.1 (241574007..241671162)
102	previous assembly	ASM28112v4 (GCF_000281125.3)	Unplaced Scaffold	NW_017712338.1 (4085815..4181655, complement)

Chromosome 2 - NC_081825.1

Genomic regions, transcripts, and products

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Genomic Sequence: NC_081825.1 Chromosome 2 Reference rAllMis1 Primary Assembly NW_017712338.1 Unplaced Scaffold Reference ASM28112v4 Primary Assembly

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Homology

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Orthologs from OrthoDB

General protein information

Go to the top of the page Help Preferred Names coiled-coil domain-containing protein 9B Names chromosome unknown C15orf52 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference rAllMis1 Primary Assembly

Genomic

1. NC_081825.1 Reference rAllMis1 Primary Assembly

   Range 241574007..241671162 Download GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_019496457.2 → XP_019352002.1  coiled-coil domain-containing protein 9B

   UniProtKB/TrEMBL A0A151MUZ3 Related ENSAMIP00015013112.1, ENSAMIT00015018927.1

Related sequences

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Nucleotide		Protein
Heading	Accession and Version

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Molecular Biology Databases

• CTD: Comparative Toxicogenomics Database
• CTD: Comparative Toxicogenomics Database - CCDC9B
• Kyoto Encyclopedia of Genes and Genomes
• Kyoto Encyclopedia of Genes and Genomes
• OrthoDB catalog of orthologs
• Orthologs

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• Functional Class Functional class of the sequence domain architecture
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